Selected Publications
Wu, M., Zhang, X., Feng, S., Freda, S. N., Kumari, P., Dumrongprechachan, V., & Kozorovitskiy, Y. (2023). Dopamine pathways mediating affective state transitions after sleep loss. Neuron. https://doi.org/10.1016/j.neuron.2023.10.002
Priest, M. F., Freda, S. N., Rieth, I. J., Badong, D., Dumrongprechachan, V., & Kozorovitskiy, Y. (2023). Peptidergic and functional delineation of the Edinger-Westphal nucleus. Cell Reports. https://doi.org/10.1016/j.celrep.2023.112992
Minkowicz, S., Mathews, M. A., Mou, F. H., Yoon, H., Freda, S. N., Cui, E. S., Kennedy, A., & Kozorovitskiy, Y. (2023). Striatal ensemble activity in an innate naturalistic behavior. eLife, https://doi.org/10.7554/eLife.87042.1
Wu, Y., Wu, M., Vásquez-Guardado, A., Kim, J., Zhang, X., Avila, R., Kim, J., Deng, Y., Yu, Y., Melzer, S., Bai, Y., Yoon, H., Meng, L., Zhang, Y., Guo, H., Hong, L., Kanatzidis, E. E., Haney, C. R., Waters, E. A., Banks, A. R., Hu, Z., Lie, F., Chamorro, L. P., Sabatini, B. L., Huang, Y., Kozorovitskiy, Y., Rogers, J. A. (2022). Wireless multi-lateral optofluidic microsystems for real-time programmable optogenetics and photopharmacology. Nature Communications, https://doi.org/10.1038/s41467-022-32947-0
Yang, Q., Liu, T., Xue, Y., Wang, H., Xu, Y., Emon, B., Wu, M., Rountree, C., Wei, T., Kandela, I., Haney, C. R., Brikha, A., Stepien, I., Hornick, J., Sponenburg, R. A., Cheng, C., Ladehoff, L., Chen, Y., Hu, Z., Wu, C., Han, M., Torkelson, J. M., Kozorovitskiy, Y., Saif, M. T. A., Huang, Y., Chang, J., Rogers, J. A. (2022). Ecoresorbable and bioresorbable microelectromechanical systems. Nature Electronics, https://doi.org/10.1038/s41928-022-00791-1.
Canton-Josh, J. E., Qin, J., Salvo, J., & Kozorovitskiy, Y. (2022). Dopaminergic regulation of vestibulo-cerebellar circuits through unipolar brush cells. eLife, https://doi.org/10.7554/eLife.76912.
Dumrongprechachan, V., Salisbury R.B., Butler L., MacDonald, M.L., and Kozorovitskiy, Y. (2022). Dynamic proteomic and phosphoproteomic atlas of corticostriatal axon neurodevelopment. eLife, https://doi.org/10.7554/eLife.78847.
Yang, Y., Wu, M., Wegener, A. J., Vázquez-Guardado, A., Efimov, A. I., Lie, F., Wang, T., Ma, Y., Banks, A., Li, Z., Xie, Z., Huang, Y., Good, C.H., Kozoroviskity, Y., Rogers, J.A. (2022) Preparation and Use of Wireless Reprogrammable Multilateral Optogenetic Devices for Behavioral Neuroscience. Nature Protocols, https://doi.org/10.1038/s41596-021-00672-5.
Freda, S.N., Priest, M.F., Badong, D., Xiao, L., Kozorovistkiy, Y. (2022) Brainwide Input-Output Architecture of Paraventricular Oxytocin and Vasopressin Neurons. BioRXIV, https://doi.org/10.1101/2022.01.17.476652.
Dumrongprechachan, V., Salisbury, R. B., Soto, G., Kumar, M., MacDonald, M. L., & Kozorovitskiy, Y. (2021). Cell-type and subcellular compartment-specific apex2 proximity labeling reveals activity-dependent nuclear proteome dynamics in the striatum. Nature Communications, 12(1). https://doi.org/10.1038/s41467-021-25144-y
Yang, Q., Wei, T., Yin, R. T., Wu, M., Xu, Y., Koo, J., Choi, Y. S., Xie, Z., Chen, S. W., Kandela, I., Yao, S., Deng, Y., Avila, R., Liu, T.-L., Bai, W., Yang, Y., Han, M., Zhang, Q., Haney, C. R., Lee, B., Aras, K., Wang, T., Seo, M., Luan, H., Lee, S. M., Brikha, A., Ghoreishi-Haack, N., Tran, L., Stepien, I., Aird, F., Waters, E. A., Yu, X., Banks, A., Trachiotis, G.D., Torkelson, J. M., Huang, Y., Kozorovitskiy, Y., Efimov, I.R., & Rogers, J. A. (2021). Photocurable bioresorbable adhesives as functional interfaces between flexible bioelectronic devices and soft biological tissues. Nature Materials. https://doi.org/10.1038/s41563-021-010151-x.
Ausra, J., Wu, M., Zhang, X., Vázquez-Guardado, A., Skelton, P., Peralta, R., Avila, R., Murickan, T., Haney, C. R., Huang, Y., Rogers, J. A., Kozorovitskiy, Y., & Gutruf, P. (2021). Wireless, battery-free, subdermally implantable platforms for transcranial and long-range optogenetics in freely moving animals. Proceedings of the National Academy of Sciences, 118(30). https://doi.org/10.1073/pnas.2025775118.
Wu, M., Minkowicz, S., Dumrongprechachan, V., Hamilton, P., & Kozorovitskiy, Y. (2021). Ketamine rapidly enhances glutamate-evoked dendritic spinogenesis in medial prefrontal cortex through dopaminergic mechanisms. Biological Psychiatry, 89(11), 1096–1105. https://doi.org/10.1016/j.biopsych.2020.12.022
Yang, Y., Wu, M., Vázquez-Guardado, A., Wegener, A. J., Grajales-Reyes, J. G., Deng, Y., Wang, T., Avila, R., Moreno, J. A., Minkowicz, S., Dumrongprechachan, V., Lee, J., Zhang, S., Legaria, A. A., Ma, Y., Mehta, S., Franklin, D., Hartman, L., Bai, W., Han, M., Zhao, H., Lu, W., Yu, Y., Sheng, X., Banks, A., Yu, X., Donaldson, Z. R., Gereau, R. W., Good, C. H., Xie, Z., Huang, Y., Kozorovitskiy, Y., & Rogers, J. A. (2021). Wireless multilateral devices for optogenetic studies of individual and social behaviors. Nature Neuroscience, 24(7), 1035–1045. https://doi.org/10.1038/s41593-021-00849-x
Wu, M., Minkowicz, S., Dumrongprechachan, V., Hamilton, P., Xiao, L., & Kozorovitskiy, Y. (2021). Attenuated dopamine signaling after aversive learning is restored by ketamine to rescue escape actions. eLife, 10. https://doi.org/10.7554/eLife.64041
Du, M., Di, Z. W., Gürsoy, D., Xian, R. P., Kozorovitskiy, Y., & Jacobsen, C. (2021). Upscaling x-ray nanoimaging to macroscopic specimens. Journal of Applied Crystallography, 54(2), 386–401. https://doi.org/10.1107/s1600576721000194
Shemetov, A. A., Monakhov, M. V., Zhang, Q., Canton-Josh, J. E., Kumar, M., Chen, M., Matlashov, M. E., Li, X., Yang, W., Nie, L., Shcherbakova, D. M., Kozorovitskiy, Y., Yao, J., Ji, N., & Verkhusha, V. V. (2021). A near-infrared genetically encoded calcium indicator for in vivo imaging. Nature Biotechnology, 39(3), 368–377. https://doi.org/10.1038/s41587-020-0710-1
Kumar, M., Kishore, S., McLean, D., & Kozorovitskiy, Y. (2021). Crossbill: An Open Access Single Objective Light-sheet Microscopy Platform. BioRxiv. https://doi.org/10.1101/2021.04.30.442190
Chen, C., Soto, G., Dumrongprechachan, V., Bannon, N., Kang, S., Kozorovitskiy, Y., & Parisiadou, L. (2020). Pathway-specific dysregulation of striatal excitatory synapses by LRRK2 mutations. eLife, 9(e58997). https://doi.org/10.7554/elife.58997
Kumar, M., Kozorovitskiy, Y. (2020). Tilt (in)variant lateral scan in oblique plane microscopy: a geometrical optics approach. Biomedical Optics Express, 11(6), 3346–3359. https://doi.org/10.1364/boe.389654
Kumar, M., Kozorovitskiy, Y. (2019). Crossbill Design GUI. https://zenodo.org/record/3544215
Kumar, M., & Kozorovitskiy, Y. (2019). Tilt-invariant scanned oblique plane illumination microscopy for large-scale volumetric imaging. Optics Letters, 44(7), 1706–1709. https://doi.org/10.1364/ol.44.001706
Kumar, M., Kishore, S., Nasenbeny, J., McLean, D. L., & Kozorovitskiy, Y. (2018). Integrated one- and two-photon scanned pblique plane illumination (SOPi) microscopy for rapid volumetric imaging. Optics Express, 26(10), 13027–13041. https://doi.org/10.1364/oe.26.013027
Xiao, L., Priest, M. F., Kozorovitskiy, Y. (2018). Oxytocin functions as a spatiotemporal filter for excitatory synaptic inputs to VTA dopamine neurons. (2018). eLife, 7. https://doi.org/10.7554/elife.33892
Banala, S., Arvin, M. C., Bannon, N. M., Jin, X.-T., Wang, Y., Zhao, G., Marshall, J. J., Gee, K. R., Wokosin, D. L., Contractor, A., Lester, H. A., Kozorovitskiy, Y., Drenan, R. M., & Lavis, L. D. (2018). Development of photoactivatable drugs enables nicotinic optopharmacology. Nature Methods, 15(5): 347-350.
Urban, B. E., Xiao, L., Chen, S., Yang, H., Dong, B., Kozorovitskiy, Y., & Zhang, H. F. (2018). In vivo super-resolution imaging of neuronal structure in the mouse brain. IEEE Transactions on Biomedical Engineering. 65(1), 232-238.
Urban, B. E., Xiao, L., Dong, B., Chen, S., Kozorovitskiy, Y., & Zhang, H. F. (2017). Imaging neuronal structure dynamics using 2-photon super-resolution patterned excitation reconstruction microscopy. Journal of Biophotonics. 11(3). https://doi.org/10.1002/jbio.201700171
Xiao, L., Priest, M.F., Nasenbeny, J., Lu, T., & Kozorovitskiy, Y. (2017). Biased oxytocinergic modulation of midbrain dopamine systems. Neuron, 95(2), 368-384. https://doi.org/10.1016/j.neuron.2017.06.003
Peixoto, R. T., Wang, W., Croney, D. M., Kozorovitskiy, Y., & Sabatini, B. L. (2016). Early hyperactivity and precocious maturation of corticostriatal circuits in shank3b−/− mice. Nature Neuroscience, 19(5), 716–724. https://doi.org/10.1038/nn.4260
Kozorovitskiy, Y., Peixoto, R., Wang, W., Saunders, A., & Sabatini, B. L. (2015). Neuromodulation of excitatory synaptogenesis in striatal development. eLife, 4, e10111
Tang, J., Szikra, T., Kozorovitskiy, Y., Teixiera, M., Sabatini, B. L., Roska, B., & Cepko, C. (2013). A nanobody-based system using fluorescent proteins as scaffolds for cell-specific gene manipulation. Cell, 154(4), 928-939.
Kwon, H., Kozorovitskiy, Y., Oh, W., Peixoto, R., Akhtar, N., Saulnier, J., Gu, C., & Sabatini, B. L. (2012). Cortical synaptogenesis and excitatory synapse number are determined via a Neuroligin-1-dependent intercellular competition. Nature Neuroscience, 15(12), 1667-1674.
Kozorovitskiy, Y., Saunders, A., Johnson, C., Lowell, B., & Sabatini, B. L. (2012). Recurrent network activity drives striatal synaptogenesis. Nature, 485(7400), 646-650.
Glasper, E., Kozorovitskiy, Y., Pavlic A., Gould, E. (2011). Paternal experience suppresses adult neurogenesis without altering hippocampal function in Peromyscus californicus. Journal of Comparative Neurology, 519(11), 2271-2281.
Leuner, B., Kozorovitskiy, Y., Gross, C., & Gould, E. (2007). Diminished adult neurogenesis in the marmoset brain precedes old age. Proceedings of the National Academy of Sciences U. S. A., 104(43), 17169–17173.
Kozorovitskiy, Y., Hughes, M., Lee, K., & Gould, E. (2006). Fatherhood affects dendritic spines and vasopressin V1a receptors in the primate prefrontal cortex. Nature Neuroscience, 9(9), 1094–1095.
Kozorovitskiy, Y., Gross, C., Copil, K., Battaglia, L., McBreen, M., Stranahan, A., & Gould, E. (2005). Experience induces structural and biochemical changes in the adult primate brain. Proceedings of the National Academy of Sciences U. S. A., 102(48), 17478–17482.
Kozorovitskiy, Y., Gould, E. (2004). Dominance hierarchy influences adult neurogenesis in the dentate gyrus. Journal of Neuroscience, 24(30), 6755–6759.
Leuner, B., Mendolia-Loffredo, S., Kozorovitskiy, Y., Samburg, D., Gould, E., & Shors, T. (2004). Learning enhances the survival of new neurons beyond the time when the hippocampus is required for memory. Journal of Neuroscience, 24(34), 7477–7481.
Shors, T., Townsend, D., Zhao, M., Kozorovitskiy, Y., & Gould, E (2002). Neurogenesis may relate to some but not all types of hippocampal-dependent learning. Hippocampus, 12, 578–584.
